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  5. AMTR_s00019p00132110

AMTR_s00019p00132110 (GAE1,...)


Aliases : GAE1, evm_27.TU.AmTr_v1.0_scaffold00019.112

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-galacturonic acid synthesis.UDP-D-glucuronic acid 4-epimerase


Gene families : OG0000504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00132110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00257170 GAE6,... Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
AT4G30440 GAE1 UDP-D-glucuronate 4-epimerase 1 0.04 OrthoFinder output from all 47 species
Aev_g08140 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12135 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g09457 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47972 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03169 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04335 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11175 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G058200.1 GAE1, Ceric.25G058200 UDP-D-glucuronic acid 4-epimerase & original... 0.06 OrthoFinder output from all 47 species
Dac_g08608 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g15331 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13114 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03704 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10634 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_17539 GAE1 UDP-D-glucuronic acid 4-epimerase 0.04 OrthoFinder output from all 47 species
LOC_Os08g41440.1 GAE6, LOC_Os08g41440 UDP-D-glucuronic acid 4-epimerase 0.06 OrthoFinder output from all 47 species
Len_g21448 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g46971 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12614 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48023 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12652 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18487 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38573 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09520 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g11657 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17123 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001061 GAE1 UDP-D-glucuronic acid 4-epimerase & original... 0.03 OrthoFinder output from all 47 species
Sam_g06740 No alias UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14395 No alias UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50170 No alias UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g018260.1.1 GAE3, Solyc10g018260 UDP-D-glucuronic acid 4-epimerase 0.06 OrthoFinder output from all 47 species
Spa_g14885 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05525 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030744_P003 GAE1, Zm00001e030744 UDP-D-glucuronic acid 4-epimerase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0044237 cellular metabolic process IEA Interproscan
MF GO:0050662 obsolete coenzyme binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 93 327
No external refs found!