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  5. AMTR_s00019p00124000

AMTR_s00019p00124000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.101

Description : Trihelix transcription factor PTL OS=Arabidopsis thaliana


Gene families : OG0000670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00124000

Target Alias Description ECC score Gene Family Method Actions
Adi_g097206 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g19379 AT-GT2, GT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21332 AT-GT2, GT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06102.t1 AT-GT2, GT2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23318.t1 Aspi01Gene23318 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G042300.1 Ceric.21G042300 not classified & original description: pacid=50604353... 0.04 OrthoFinder output from all 47 species
Dac_g23379 AT-GT2, GT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_28594 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g10516 emb2746 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30616 emb2746 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000015 phosphopyruvate hydratase complex IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004634 phosphopyruvate hydratase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017089 glycolipid transfer activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046836 glycolipid transport IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051861 glycolipid binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!