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  5. AMTR_s00019p00119370

AMTR_s00019p00119370 (ASHR3, SDG4,...)


Aliases : ASHR3, SDG4, evm_27.TU.AmTr_v1.0_scaffold00019.96

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class II/ASH1 histone methyltransferase component


Gene families : OG0001934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00119370
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AT2G44150 ASHH3, SDG7 histone-lysine N-methyltransferase ASHH3 0.03 OrthoFinder output from all 47 species
Als_g10997 ASHR3, SDG4 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aob_g14189 ASHH3, SDG7 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dcu_g18639 ASHH3, SDG7 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
GSVIVT01023699001 ASHR3, SDG4 Chromatin organisation.histone modifications.histone... 0.05 OrthoFinder output from all 47 species
Mp6g20020.1 ASHR3, SDG4 class II/ASH1 histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Nbi_g03125 ASHR3, SDG4 EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Ppi_g18359 ASHR3, SDG4 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Sam_g37696 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Spa_g52643 ASHR3, SDG4 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Zm00001e022951_P002 ASHR3, SDG4,... class II/ASH1 histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 357 462
No external refs found!