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  5. AMTR_s00019p00088750

AMTR_s00019p00088750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.66

Description : Protein TSS OS=Arabidopsis thaliana


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00088750

Target Alias Description ECC score Gene Family Method Actions
AT1G01320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 OrthoFinder output from all 47 species
Adi_g071573 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g077986 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g15019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g46749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G017100.1 Ceric.12G017100 not classified & original description: pacid=50600997... 0.04 OrthoFinder output from all 47 species
Dcu_g34188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01027120001 No alias Protein TSS OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os04g55230.1 LOC_Os04g55230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 OrthoFinder output from all 47 species
LOC_Os07g23990.1 LOC_Os07g23990 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
Lfl_g03522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
MA_10436966g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 111.0) 0.06 OrthoFinder output from all 47 species
Msp_g42756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03731 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo442478 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Solyc01g095900.4.1 Solyc01g095900 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
Solyc06g068230.4.1 Solyc06g068230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
Solyc07g006030.4.1 Solyc07g006030 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
Spa_g02169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22658 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA

No InterPro domains available for this sequence

No external refs found!