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Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.56
Description : Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G74400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036750 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g057083 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g083164 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101200 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g109057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g111214 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g117556 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g23848 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g25067 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g42381 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16773 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24726 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30485 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05672 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g09497 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g13404 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03404 | MEF22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28638 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g33018 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70560 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene14821.t1 | CRR2, Aspi01Gene14821 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34731.t1 | Aspi01Gene34731 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34785.t1 | Aspi01Gene34785 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene66052.t1 | Aspi01Gene66052 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71401.t1 | REME1, Aspi01Gene71401 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012535 | No alias | not classified & original description: CDS=1-2328 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0081.g038550 | EMB2758 | not classified & original description: CDS=1-1851 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0104.g044768 | EMB2758 | not classified & original description: CDS=1-1815 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0112.g045771 | No alias | not classified & original description: CDS=1-2433 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0349.g066478 | OTP84 | not classified & original description: CDS=1-2082 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0405.g068373 | No alias | not classified & original description: CDS=1-2967 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0808.g087728 | CRR22 | not classified & original description: CDS=1-2094 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0908.g092257 | No alias | not classified & original description: CDS=1-1875 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s1835.g107332 | CRR22 | not classified & original description: CDS=1-2094 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g19898 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29994 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.01G062600.1 | Ceric.01G062600 | not classified & original description: pacid=50592906... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G069300.1 | OTP86, Ceric.09G069300 | not classified & original description: pacid=50588354... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.25G002100.1 | Ceric.25G002100 | not classified & original description: pacid=50593112... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g22525 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g30103 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30474 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g35673 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g45650 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06413 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07656 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08668 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16953 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17302 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g18580 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g26543 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g30253 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36052 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g39512 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43307 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45215 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g48025 | MEF21 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g48207 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05220 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g13218 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g17418 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22711 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23591 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g37952 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g47807 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12413 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13294 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036757001 | OTP84 | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_29557 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g60430.1 | LOC_Os01g60430 | RNA editing factor (MEF10) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g49830.1 | LOC_Os02g49830 | Pentatricopeptide repeat-containing protein At3g22690... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g59264.1 | LOC_Os03g59264 | lectin chaperone (CRT) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g58980.1 | LOC_Os04g58980 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g05560.1 | LOC_Os07g05560 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g02904 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17579 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g23407 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g36973 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g25864 | OSB4 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g04397 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17723 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g21090 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g23222 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g39535 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g05446 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06311 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10800 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g15565 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15698 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g16042 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g22892 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27962 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g29848 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g38647 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g43448 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08923 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g12341 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g12671 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17400 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18652 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43122 | OTP82 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g44362 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03036 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g37149 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g02465 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23581 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26402 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g30213 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04713 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06828 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07564 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14465 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32617 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56364 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62422 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000561 | No alias | not classified & original description: CDS=191-3046 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000780 | No alias | not classified & original description: CDS=1-3003 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003208 | No alias | monogalactosyldiacylglycerol lipase *(HIL1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009138 | No alias | component *(NRPC16/RPC34) of TFIIIe transcription factor... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0061.g015358 | No alias | not classified & original description: CDS=223-2631 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g44584 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50518 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g27883 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g32763 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g44754 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g55537 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g55549 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g29126 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012422_P001 | OSB1, Zm00001e012422 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013166_P001 | Zm00001e013166 | Pentatricopeptide repeat-containing protein At4g14820... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006553 | lysine metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009085 | lysine biosynthetic process | IEP | HCCA |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016426 | tRNA (adenine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0030488 | tRNA methylation | IEP | HCCA |
| CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| CC | GO:0034708 | methyltransferase complex | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| CC | GO:0043527 | tRNA methyltransferase complex | IEP | HCCA |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| No external refs found! |