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  5. AMTR_s00019p00035300

AMTR_s00019p00035300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.14

Description : Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00035300

Target Alias Description ECC score Gene Family Method Actions
Ala_g02404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g17080.1 LOC_Os08g17080 Pentatricopeptide repeat-containing protein At1g80880,... 0.04 OrthoFinder output from all 47 species
MA_387336g0010 No alias Pentatricopeptide repeat-containing protein At3g22670,... 0.02 OrthoFinder output from all 47 species
MA_929381g0010 OTP43 OTP43 mitochondrial RNA splicing factor 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000046 No alias not classified & original description: CDS=1-1437 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008361 No alias not classified & original description: CDS=1-1977 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 33 58
IPR002885 Pentatricopeptide_repeat 110 134
No external refs found!