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Aliases : evm_27.TU.AmTr_v1.0_scaffold00018.171
Description : Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0001572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001572_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G64680 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g033681 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g02991 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g49501 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06641 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g11103 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g00455 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g06285 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g31538 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g13955 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19690 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008838 | No alias | carotenoid isomerase *(DWARF27) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0386.g067568 | No alias | not classified & original description: CDS=62-952 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G115700.1 | Ceric.02G115700 | carotenoid isomerase *(DWARF27) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G025400.1 | Ceric.09G025400 | not classified & original description: pacid=50588408... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g13831 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g02296 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12391 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019663001 | No alias | Beta-carotene isomerase D27, chloroplastic OS=Oryza... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_18729 | No alias | carotenoid isomerase (DWARF27) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g02210.2 | LOC_Os08g02210 | Beta-carotene isomerase D27, chloroplastic... | 0.08 | OrthoFinder output from all 47 species | |
| Len_g16141 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g11491 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g13325 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_167711g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g03970.1 | No alias | Beta-carotene isomerase D27, chloroplastic OS=Oryza... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g11577 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g26733 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g19910 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g09207 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pnu_g26521 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g62487 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g06073 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Smo173467 | No alias | Phytohormones.strigolactone.synthesis.DWARF27... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g008630.4.1 | Solyc08g008630 | Beta-carotene isomerase D27, chloroplastic OS=Oryza... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g05404 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g19072 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g19073 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g28773 | No alias | carotenoid isomerase *(DWARF27) & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e011261_P001 | Zm00001e011261 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e029191_P001 | Zm00001e029191 | Beta-carotene isomerase D27, chloroplastic... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| BP | GO:0006541 | glutamine metabolic process | IEP | HCCA |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016211 | ammonia ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | HCCA |
| BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0030151 | molybdenum ion binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| BP | GO:0045454 | cell redox homeostasis | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025114 | D27-like_C | 151 | 234 |
| No external refs found! |