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  5. AMTR_s00018p00247260

AMTR_s00018p00247260 (iqd17,...)


Aliases : iqd17, evm_27.TU.AmTr_v1.0_scaffold00018.157

Description : Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana


Gene families : OG0000740 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000740_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00018p00247260
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G01110 IQD18 IQ-domain 18 0.05 OrthoFinder output from all 47 species
AT4G10640 IQD16 IQ-domain 16 0.03 OrthoFinder output from all 47 species
AT5G03040 iqd2 IQ-domain 2 0.03 OrthoFinder output from all 47 species
Adi_g021091 iqd17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058759 iqd17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g064355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103411 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01302 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18196 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23783 IQD6 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g12335 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22740 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04454 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37610 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28292.t1 IQD13, Aspi01Gene28292 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49314.t1 IQD3, Aspi01Gene49314 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025364 iqd17 not classified & original description: CDS=155-1645 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g039031 iqd17 not classified & original description: CDS=1-1224 0.05 OrthoFinder output from all 47 species
Azfi_s0190.g056933 IQD14 not classified & original description: CDS=42-1352 0.05 OrthoFinder output from all 47 species
Ceric.02G098100.1 IQD3, Ceric.02G098100 not classified & original description: pacid=50584578... 0.02 OrthoFinder output from all 47 species
Ceric.14G012900.1 IQD6, Ceric.14G012900 not classified & original description: pacid=50633767... 0.08 OrthoFinder output from all 47 species
Ceric.24G079200.1 iqd2, Ceric.24G079200 not classified & original description: pacid=50628687... 0.03 OrthoFinder output from all 47 species
Ceric.29G054200.1 iqd2, Ceric.29G054200 not classified & original description: pacid=50625263... 0.03 OrthoFinder output from all 47 species
Ceric.34G011600.1 IQD3, Ceric.34G011600 not classified & original description: pacid=50623826... 0.07 OrthoFinder output from all 47 species
Ceric.39G025000.1 IQD18, Ceric.39G025000 not classified & original description: pacid=50583633... 0.06 OrthoFinder output from all 47 species
Dac_g08268 IQD3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09476 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16921 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24360 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25965 IQD19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016320001 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01019668001 iqd17 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
GSVIVT01027429001 iqd17 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01038630001 IQD18 No description available 0.07 OrthoFinder output from all 47 species
Gb_20874 iqd2 microtubule - plasma membrane linkage regulator (IQD13) 0.03 OrthoFinder output from all 47 species
LOC_Os05g03190.1 iqd2, LOC_Os05g03190 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os08g02250.1 iqd17, LOC_Os08g02250 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g04290 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g20587 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g39517 iqd17 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g02292 iqd17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08415 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17221 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36929 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430537g0050 IQD3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_19597g0010 iqd17 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Mp3g23600.1 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Msp_g31509 IQD3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13108 IQD3 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g27547 iqd17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29285 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07367 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09602 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12516 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g55284 iqd2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08123 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12855 IQD3 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g29600 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014897 IQD3 not classified & original description: CDS=874-2742 0.04 OrthoFinder output from all 47 species
Sam_g10433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo67789 iqd2 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc08g083240.3.1 IQD18, Solyc08g083240 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g007410.3.1 iqd2, Solyc09g007410 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g005000.4.1 iqd17, Solyc10g005000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g07293 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09001 IQD3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09399 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10396 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11949 iqd2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13660 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021855_P001 iqd17, Zm00001e021855 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e027583_P001 iqd2, Zm00001e027583 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e029506_P001 iqd2, Zm00001e029506 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 87 105
IPR000048 IQ_motif_EF-hand-BS 111 125
IPR025064 DUF4005 339 432
No external refs found!