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  5. AMTR_s00018p00028320

AMTR_s00018p00028320 (RCI3, RCI3A,...)


Aliases : RCI3, RCI3A, evm_27.TU.AmTr_v1.0_scaffold00018.5

Description : Peroxidase 5 OS=Vitis vinifera


Gene families : OG0000013 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00018p00028320

Target Alias Description ECC score Gene Family Method Actions
AT2G18980 No alias Peroxidase superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G39040 No alias Peroxidase superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G01190 No alias Peroxidase superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G08780 No alias Peroxidase superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g38813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z172700.1 Ceric.1Z172700 not classified & original description: pacid=50567852... 0.03 OrthoFinder output from all 47 species
Ehy_g22902 PA2, ATPA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_14034 No alias Peroxidase 4 OS=Vitis vinifera (sp|a7ny33|per4_vitvi : 413.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g07770.1 LOC_Os01g07770 Peroxidase 25 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g55410.1 LOC_Os03g55410 Peroxidase 51 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_49450g0010 No alias Peroxidase 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_873145g0010 No alias Peroxidase 70 OS=Zea mays (sp|a5h452|per70_maize : 180.0) 0.02 OrthoFinder output from all 47 species
MA_91294g0010 No alias Peroxidase 47 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_91294g0020 No alias Peroxidase 47 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g16910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g101050.3.1 Solyc01g101050 Peroxidase 5 OS=Vitis vinifera (sp|a7qeu4|per5_vitvi : 342.0) 0.03 OrthoFinder output from all 47 species
Solyc05g046020.3.1 RCI3, RCI3A,... Peroxidase 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g046030.4.1 RCI3, RCI3A,... Peroxidase 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g017880.4.1 Solyc07g017880 Peroxidase 16 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g052510.4.1 RCI3, RCI3A,... Peroxidase 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g005370.2.1 Solyc12g005370 Peroxidase 27 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e021338_P001 Zm00001e021338 Peroxidase 43 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e025182_P001 RCI3, RCI3A,... Peroxidase 39 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e027545_P001 Zm00001e027545 Peroxidase 2 OS=Zea mays (sp|q9feq8|per2_maize : 229.0) 0.03 OrthoFinder output from all 47 species
Zm00001e037143_P001 Zm00001e037143 Peroxidase 4 OS=Vitis vinifera (sp|a7ny33|per4_vitvi : 338.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA Interproscan
BP GO:0006979 response to oxidative stress IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002016 Haem_peroxidase 41 289
No external refs found!