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  5. AMTR_s00017p00256710

AMTR_s00017p00256710 (SKP2A,...)


Aliases : SKP2A, evm_27.TU.AmTr_v1.0_scaffold00017.283

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.SKP component


Gene families : OG0004331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004331_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00017p00256710

Target Alias Description ECC score Gene Family Method Actions
AT1G21410 SKP2A F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
Dcu_g03845 SKP2A substrate adaptor *(SKP2) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Zm00001e019063_P001 SKP2A, Zm00001e019063 component F-box of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 108 142
No external refs found!