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  5. AMTR_s00017p00244380

AMTR_s00017p00244380 (LAZ2, CCR1, ASHH2,...)


Aliases : LAZ2, CCR1, ASHH2, EFS, SDG8, evm_27.TU.AmTr_v1.0_scaffold00017.225

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class II/ASH1 histone methyltransferase component


Gene families : OG0002779 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00017p00244380

Target Alias Description ECC score Gene Family Method Actions
AT1G77300 LAZ2, CCR1,... histone methyltransferases(H3-K4 specific);histone... 0.06 OrthoFinder output from all 47 species
Adi_g077943 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ala_g15107 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ala_g16828 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ala_g38267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G090900.1 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ceric.16G004500.1 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dcu_g07783 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Dcu_g34107 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ehy_g29255 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
GSVIVT01008805001 LAZ2, CCR1,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Lfl_g08097 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
MA_10431902g0010 LAZ2, CCR1,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_12870g0010 LAZ2, CCR1,... Histone-lysine N-methyltransferase ASHH2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_198673g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14028 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Nbi_g14761 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ore_g38219 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ore_g41514 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Sam_g25561 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Solyc04g057880.3.1 LAZ2, CCR1,... class II/ASH1 histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Tin_g09952 LAZ2, CCR1,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 1248 1354
IPR011124 Znf_CW 1076 1123
No external refs found!