AMTR_s00017p00241740 (EMB2780,...)

Aliases : EMB2780, evm_27.TU.AmTr_v1.0_scaffold00017.217

Description : Cell cycle.interphase.DNA replication.elongation.DNA polymerase delta complex.POLD1 component

Gene families : OG0002006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002006_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00017p00241740

Target	Alias	Description	ECC score	Gene Family Method
Adi_g057535	EMB2780	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0008.g011315	ATREV3, REV3	not classified & original description: CDS=841-2013	0.05	OrthoFinder output from all 47 species
Azfi_s1989.g108568	EMB2780	component *(POLD1) of DNA polymerase delta complex &...	0.03	OrthoFinder output from all 47 species
Ceric.29G084300.1	EMB2780, Ceric.29G084300	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Sam_g08942	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g52091	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g21973	EMB2780	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003887	DNA-directed DNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034061	DNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006133	DNA-dir_DNA_pol_B_exonuc	114	457
IPR025687	Znf-C4pol	991	1063
IPR006134	DNA-dir_DNA_pol_B_multi_dom	530	959

External Links

No external refs found!

AMTR_s00017p00241740 (EMB2780,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation