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  5. AMTR_s00017p00209650

AMTR_s00017p00209650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.135

Description : Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00017p00209650
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT2G17880 No alias Chaperone DnaJ-domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G13830 J20 DNAJ-like 20 0.03 OrthoFinder output from all 47 species
AT4G36040 No alias Chaperone DnaJ-domain superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g08419 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09684 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11541 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13865 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g21455 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g00782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07977 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34742 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g25607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08695 ERDJ3B, ATERDJ3B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17401 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38054.t1 J20, Aspi01Gene38054 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41428.t1 Aspi01Gene41428 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037845 No alias not classified & original description: CDS=1-747 0.02 OrthoFinder output from all 47 species
Azfi_s0365.g066960 No alias not classified & original description: CDS=1-849 0.04 OrthoFinder output from all 47 species
Ceric.08G060000.1 ERDJ3B,... not classified & original description: pacid=50638460... 0.03 OrthoFinder output from all 47 species
Ceric.17G063000.1 ATDJC39, ARL2,... not classified & original description: pacid=50617965... 0.02 OrthoFinder output from all 47 species
Dac_g20831 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22715 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26222 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04446 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13496 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014782001 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01021014001 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_01235 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_02868 No alias Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_04899 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_04900 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_09159 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_09162 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_13828 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_36084 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os08g43490.1 LOC_Os08g43490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g16635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g38368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g46222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427494g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_116117g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_19658g0010 ATDJC39, ARL2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_241669g0010 ERDJ3B, ATERDJ3B Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_276247g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_281725g0010 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_356104g0010 J20 Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_673025g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_696786g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g20430.1 J20 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g06689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08536 ATDJC39, ARL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08236 ATDJC39, ARL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08237 ATDJC39, ARL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003473 No alias not classified & original description: CDS=1-837 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020373 J20 not classified & original description: CDS=1-741 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0272.g027030 J20 not classified & original description: CDS=166-684 0.03 OrthoFinder output from all 47 species
Smo9299 ATDJC39, ARL2 No description available 0.03 OrthoFinder output from all 47 species
Solyc04g081530.1.1 Solyc04g081530 Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g065960.1.1 Solyc07g065960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g065970.1.1 Solyc07g065970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g10254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001518_P001 J2, ATJ2, Zm00001e001518 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e003997_P001 Zm00001e003997 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013284_P001 Zm00001e013284 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e017189_P001 J20, Zm00001e017189 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e024686_P001 Zm00001e024686 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e025612_P001 J20, Zm00001e025612 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 46 109
No external refs found!