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  5. AMTR_s00017p00207950

AMTR_s00017p00207950 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.130

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.MAC5 component


Gene families : OG0002868 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002868_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00017p00207950

Target Alias Description ECC score Gene Family Method Actions
AT1G07360 No alias CCCH-type zinc fingerfamily protein with RNA-binding domain 0.03 OrthoFinder output from all 47 species
Mp1g00530.1 No alias C3H zinc finger transcription factor. component MAC5 of... 0.03 OrthoFinder output from all 47 species
Nbi_g14693 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.02 OrthoFinder output from all 47 species
Solyc04g017710.3.1 Solyc04g017710 C3H zinc finger transcription factor. component MAC5 of... 0.02 OrthoFinder output from all 47 species
Solyc10g079190.3.1 Solyc10g079190 C3H zinc finger transcription factor. component MAC5 of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 229 286
No external refs found!