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  5. AMTR_s00017p00177990

AMTR_s00017p00177990 (LACS9,...)


Aliases : LACS9, evm_27.TU.AmTr_v1.0_scaffold00017.91

Description : Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond


Gene families : OG0001695 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001695_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00017p00177990
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT1G77590 LACS9 long chain acyl-CoA synthetase 9 0.12 OrthoFinder output from all 47 species
Ala_g02426 LACS9 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Dac_g07959 LACS9 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01030119001 LACS8 Long chain acyl-CoA synthetase 8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os11g06880.1 LACS9, LOC_Os11g06880 Long chain acyl-CoA synthetase 9, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g51083 LACS9 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Ppi_g13546 LACS8 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Tin_g13873 LACS9 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Tin_g17310 LACS8 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Zm00001e024501_P002 LACS9, Zm00001e024501 Long chain acyl-CoA synthetase 9, chloroplastic... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 108 589
No external refs found!