Zm00001d021908 (GRMZM2G072054)


Aliases : GRMZM2G072054

Description : 8.1.6 TCA / org transformation.TCA.succinyl-CoA ligase Succinyl-CoA ligase, alpha subunit


Gene families : OG_01_0003395 (Gene family) Phylogenetic Tree(s): OG0003395_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d021908
Cluster HCCA cluster: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AT5G08300 No alias Succinyl-CoA ligase, alpha subunit 0.1 Gene family
Cpa|evm.model.tig00000254.114 No alias 8.1.6 TCA / org transformation.TCA.succinyl-CoA ligase... 0.01 Gene family
Cre03.g193850 No alias 8.1.6 TCA / org transformation.TCA.succinyl-CoA ligase... 0.07 Gene family
GSVIVT01029337001 No alias 8.1.6 TCA / org transformation.TCA.succinyl-CoA ligase... 0.03 Gene family
LOC_Os07g38970 Os07g0577700 8.1.6 TCA / org transformation.TCA.succinyl-CoA ligase... 0.18 Gene family
Smo405593 PACid_15414101 8.1.6 TCA / org transformation.TCA.succinyl-CoA ligase... 0.02 Gene family
Solyc01g007910.3.1 Solyc01g007910.3 8.1.6 TCA / org transformation.TCA.succinyl-CoA ligase... 0.12 Gene family
Solyc02g005350.3.1 Solyc02g005350.3 8.1.6 TCA / org transformation.TCA.succinyl-CoA ligase... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003781 CoA-bd 40 133
IPR005811 CoA_ligase 186 307
No external refs found!