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  5. AMTR_s00016p00245800

AMTR_s00016p00245800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.280

No description available


Gene families : OG0005743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00245800

Target Alias Description ECC score Gene Family Method Actions
AT1G28190 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.08 OrthoFinder output from all 47 species
AT5G12340 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 OrthoFinder output from all 47 species
GSVIVT01037265001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_11824 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_26414 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g72360.1 LOC_Os01g72360 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g24100.1 LOC_Os03g24100 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os07g46510.1 LOC_Os07g46510 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g33050.1 LOC_Os11g33050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10248626g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10381881g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10435613g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_118095g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_168522g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_218732g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_311429g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_3598186g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_374419g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_5824616g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_600517g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_74636g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_88642g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g057830.1.1 Solyc04g057830 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e011175_P001 Zm00001e011175 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e018591_P001 Zm00001e018591 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e024210_P001 Zm00001e024210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026856_P001 Zm00001e026856 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e031559_P001 Zm00001e031559 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e038180_P001 Zm00001e038180 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 18 213
No external refs found!