LOC_Os09g29310.1


Description : RING-H2-class E3 ligase


Gene families : OG_01_0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0001529 (LandPlants) Phylogenetic Tree(s): OG_02_0001529_tree ,
OG_03_0000773 (SeedPlants) Phylogenetic Tree(s): OG_03_0000773_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g29310.1
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00203540 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00003p00240920 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00007p00056710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00044p00211560 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00044p00221710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00077p00074350 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT2G18670 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G03550 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G43430 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G17600 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.03 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT5G66070 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01012019001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01015682001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01019530001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01028038001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01037142001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_07702 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_15297 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Gb_22087 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
LOC_Os01g60730.2 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g35329.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g45580.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os08g06090.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os12g42540.1 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10208579g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434759g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_1115518g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
MA_2679g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_391590g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_402876g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_55185g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_552961g0010 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_61349g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_754688g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_786911g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_8609304g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9143538g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_92400g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Smo172324 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo417984 No alias No description available 0.03 Archaeplastida
Smo438800 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo59303 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g088440.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc04g007500.1.1 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Solyc05g008640.1.1 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Solyc05g010175.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc10g011880.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e002430_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e003264_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e011306_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014286_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e014302_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e016470_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e023238_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023260_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e037107_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e038229_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e039314_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.03 LandPlants
MA_5076208g0010 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Gb_14312 No alias RING-H2-class E3 ligase 0.02 SeedPlants
MA_10436208g0010 No alias RING-H2-class E3 ligase 0.01 SeedPlants
MA_98187g0010 No alias RING-H2-class E3 ligase 0.01 SeedPlants
Zm00001e009988_P001 No alias RING-H2-class E3 ligase 0.02 SeedPlants
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 124 167
No external refs found!