AMTR_s00016p00196760 (VNI2, NAC083,...)

Aliases : VNI2, NAC083, ANAC083, evm_27.TU.AmTr_v1.0_scaffold00016.162

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00016p00196760

Target	Alias	Description	ECC score	Gene Family Method
AT3G18400	anac058, NAC058	NAC domain containing protein 58	0.03	OrthoFinder output from all 47 species
AT5G13180	VNI2, NAC083, ANAC083	NAC domain containing protein 83	0.03	OrthoFinder output from all 47 species
Adi_g007378	anac078, NAC2	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g113716	NAC025, anac025	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g06435	FEZ, ANAC009	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g11860	NARS1, NAC2,...	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g16372	NAC094, anac094	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g19716	ATNAC3, ANAC055,...	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g23575	ATCUC2, ANAC098, CUC2	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g25115	ANAC019, NAC019	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g15579	NARS1, NAC2,...	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene33274.t1	ATCUC2, ANAC098,...	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene60892.t1	ANAC018, NAM,...	NAC-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g010242	NAC053, anac053	NAC-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.02G064600.1	anac078, NAC2,...	NAC-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.27G021000.1	anac078, NAC2,...	NAC-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.32G060500.1	NAC025, anac025,...	NAC-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g06475	anac078, NAC2	NAC-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g19380	ATCUC2, ANAC098, CUC2	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g24611	ANAC100, ATNAC5, NAC100	NAC-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g05677	NAC053, anac053	NAC-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008839001	ANAC002, ATAF1	RNA biosynthesis.transcriptional activation.NAC...	0.04	OrthoFinder output from all 47 species
GSVIVT01019952001	ATNAP, NAP, ANAC029	RNA biosynthesis.transcriptional activation.NAC...	0.03	OrthoFinder output from all 47 species
LOC_Os03g42630.1	anac058, NAC058,...	transcription factor (NAC)	0.03	OrthoFinder output from all 47 species
LOC_Os03g60080.1	anac081, ATAF2,...	transcription factor (NAC)	0.02	OrthoFinder output from all 47 species
LOC_Os05g34830.1	ANAC002, ATAF1,...	transcription factor (NAC)	0.03	OrthoFinder output from all 47 species
LOC_Os07g12340.1	NAC032, anac032,...	transcription factor (NAC)	0.03	OrthoFinder output from all 47 species
Len_g11173	anac057, NAC057	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g30742	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10431189g0020	ANAC034, LOV1,...	transcription factor (NAC)	0.03	OrthoFinder output from all 47 species
MA_73369g0010	FEZ, ANAC009	transcription factor (NAC)	0.03	OrthoFinder output from all 47 species
Mp4g11910.1	anac057, NAC057	transcription factor (NAC)	0.02	OrthoFinder output from all 47 species
Mp6g02590.1	ANAC100, ATNAC5, NAC100	transcription factor (NAC)	0.02	OrthoFinder output from all 47 species
Msp_g13717	anac078, NAC2	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g15316	NAC032, anac032	NAC-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g09910	NARS1, NAC2,...	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g16702	ATCUC2, ANAC098, CUC2	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g27787	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g31115	ATCUC2, ANAC098, CUC2	NAC-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g00886	ANAC020, NAC020	NAC-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g29103	ATNAP, NAP, ANAC029	NAC-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g00666	ANAC019, NAC019	NAC-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g26010	ANAC070, BRN2, NAC070	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010438	ANAC018, NAM,...	NAC-type transcription factor & original description: CDS=457-921	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010470	ANAC054, ATNAC1, CUC1	NAC-type transcription factor & original description: CDS=1-813	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023754	ANAC018, NAM,...	NAC-type transcription factor & original description: CDS=1-1032	0.03	OrthoFinder output from all 47 species
Solyc05g021090.4.1	NAC042, anac042,...	transcription factor (NAC)	0.04	OrthoFinder output from all 47 species
Solyc07g045030.4.1	NAC042, anac042,...	transcription factor (NAC)	0.03	OrthoFinder output from all 47 species
Solyc12g013620.2.1	RD26, ANAC072,...	transcription factor (NAC)	0.03	OrthoFinder output from all 47 species
Spa_g42161	NAC094, anac094	NAC-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e009384_P001	NAC032, anac032,...	transcription factor (NAC)	0.03	OrthoFinder output from all 47 species
Zm00001e012982_P001	anac021, NAC1,...	transcription factor (NAC)	0.02	OrthoFinder output from all 47 species
Zm00001e019046_P002	ANAC002, ATAF1,...	transcription factor (NAC)	0.02	OrthoFinder output from all 47 species
Zm00001e019473_P001	anac081, ATAF2,...	transcription factor (NAC)	0.03	OrthoFinder output from all 47 species
Zm00001e024028_P001	ANAC087, Zm00001e024028	transcription factor (NAC)	0.03	OrthoFinder output from all 47 species
Zm00001e028872_P002	NAC032, anac032,...	transcription factor (NAC)	0.04	OrthoFinder output from all 47 species
Zm00001e030150_P001	NAC036, anac036,...	transcription factor (NAC)	0.04	OrthoFinder output from all 47 species
Zm00001e035884_P001	ANAC087, Zm00001e035884	transcription factor (NAC)	0.02	OrthoFinder output from all 47 species
Zm00001e036720_P002	EMB2749,...	transcription factor (NAC)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	14	138

External Links

No external refs found!

AMTR_s00016p00196760 (VNI2, NAC083,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation