1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00016p00194610

AMTR_s00016p00194610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.159

Description : Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type)


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00194610

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00219640 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.05 OrthoFinder output from all 47 species
AMTR_s00049p00187620 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.05 OrthoFinder output from all 47 species
AT2G04090 No alias MATE efflux family protein 0.05 OrthoFinder output from all 47 species
Ceric.28G041500.1 Ceric.28G041500 metabolite transporter *(DTX) & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01008370001 No alias Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
GSVIVT01020806001 TT12, ATTT12 Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
GSVIVT01020808001 TT12, ATTT12 Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
LOC_Os02g57580.1 LOC_Os02g57580 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
LOC_Os10g20350.1 LOC_Os10g20350 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
MA_114301g0010 TT12, ATTT12 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
MA_20558g0020 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_407755g0010 No alias metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
MA_433264g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_45692g0010 TT12, ATTT12 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Smo118985 No alias Solute transport.carrier-mediated transport.MOP... 0.05 OrthoFinder output from all 47 species
Smo234895 No alias Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
Solyc10g051130.3.1 Solyc10g051130 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e010476_P002 Zm00001e010476 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e012504_P001 Zm00001e012504 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e035104_P001 Zm00001e035104 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006855 xenobiotic transmembrane transport IEA Interproscan
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 45 204
IPR002528 MATE_fam 266 427
No external refs found!