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  5. AMTR_s00016p00184680

AMTR_s00016p00184680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.146

Description : Leucine-rich repeat protein 1 OS=Arabidopsis thaliana


Gene families : OG0000331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00184680

Target Alias Description ECC score Gene Family Method Actions
AT1G71830 SERK1, ATSERK1 somatic embryogenesis receptor-like kinase 1 0.06 OrthoFinder output from all 47 species
AT5G21090 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
Adi_g023666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103683 ATSERK2, SERK2 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Als_g37002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62535.t1 Aspi01Gene62535 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g01289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25848 ATSERK2, SERK2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013353001 No alias BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase... 0.03 OrthoFinder output from all 47 species
Gb_01067 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.03 OrthoFinder output from all 47 species
LOC_Os04g38480.1 SERK1, ATSERK1,... brassinosteroid co-receptor protein kinase (BAK).... 0.02 OrthoFinder output from all 47 species
LOC_Os11g31530.1 ATSERK2, SERK2,... LRR receptor kinase SERK2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Lfl_g04529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_441512g0010 No alias Probable LRR receptor-like serine/threonine-protein... 0.02 OrthoFinder output from all 47 species
MA_643909g0010 No alias LRR receptor-like serine/threonine-protein kinase... 0.03 OrthoFinder output from all 47 species
MA_92230g0010 No alias Leucine-rich repeat protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g26220.1 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.02 OrthoFinder output from all 47 species
Msp_g43770 SERK1, ATSERK1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40227 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g24606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11453 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g009810.3.1 ATSERK2, SERK2,... Leucine-rich repeat protein 1 OS=Capsicum annuum... 0.03 OrthoFinder output from all 47 species
Spa_g02725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028890_P001 Zm00001e028890 Leucine-rich repeat protein 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e040999_P001 SERK1, ATSERK1,... brassinosteroid co-receptor protein kinase (BAK).... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 19 59
IPR025875 Leu-rich_rpt_4 111 147
IPR001611 Leu-rich_rpt 159 182
IPR001611 Leu-rich_rpt 87 109
No external refs found!