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Aliases : AFB2, evm_27.TU.AmTr_v1.0_scaffold00016.85
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component
Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G49980 | AFB5 | auxin F-box protein 5 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g001615 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005427 | AFB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g015381 | COI1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g023634 | AFB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02207 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02239 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11817 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g01939 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g03539 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g24321 | TIR1 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13268 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene00663.t1 | TIR1, Aspi01Gene00663 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene05156.t1 | COI1, Aspi01Gene05156 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene06540.t1 | AFB2, Aspi01Gene06540 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene17403.t1 | COI1, Aspi01Gene17403 | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene32882.t1 | COI1, Aspi01Gene32882 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene60504.t1 | TIR1, Aspi01Gene60504 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene60736.t1 | AFB2, Aspi01Gene60736 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G036600.1 | COI1, Ceric.05G036600 | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.11G069600.1 | COI1, Ceric.11G069600 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.16G039600.1 | AFB2, Ceric.16G039600 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z143900.1 | COI1, Ceric.1Z143900 | not classified & original description: pacid=50567868... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z144000.1 | COI1, Ceric.1Z144000 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g10385 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g06039 | TIR1 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01003183001 | TIR1 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009126001 | AFB5 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033011001 | AFB2 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_07237 | COI1 | Coronatine-insensitive protein homolog 1b OS=Oryza... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g32460.1 | AFB2, LOC_Os04g32460 | component TIR1/AFB of auxin receptor complex. component... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g10354 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13483 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g15985 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g24014 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03292 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_78902g0010 | AFB5 | component TIR1/AFB of auxin receptor complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g26590.1 | COI1 | component COI of jasmonic acid receptor complex | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14907 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26263 | TIR1 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g07658 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c9_1680V3.1 | Pp3c9_1680 | RNI-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g03902 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019379 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g19822 | No alias | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24051 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28215 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo104859 | No alias | Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Smo163526 | COI1 | Coronatine-insensitive protein 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g18002 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50974 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06047 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g10047 | AFB2 | substrate adaptor of SCF E3 ubiquiTin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12321 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008324_P001 | AFB2, Zm00001e008324 | component TIR1/AFB of auxin receptor complex. component... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026935_P001 | COI1, Zm00001e026935 | component COI of jasmonic acid receptor complex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027505_P001 | TIR1, Zm00001e027505 | component TIR1/AFB of auxin receptor complex. component... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038839_P001 | AFB5, Zm00001e038839 | component TIR1/AFB of auxin receptor complex. component... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |