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  5. AMTR_s00016p00120390

AMTR_s00016p00120390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.80

Description : GEM-like protein 5 OS=Arabidopsis thaliana


Gene families : OG0000595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000595_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00120390
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT5G08350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.05 OrthoFinder output from all 47 species
AT5G13200 No alias GRAM domain family protein 0.06 OrthoFinder output from all 47 species
AT5G23350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.05 OrthoFinder output from all 47 species
AT5G23360 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.06 OrthoFinder output from all 47 species
Adi_g005528 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058861 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116978 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11767 GEM not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07158 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46794.t1 FIP1, Aspi01Gene46794 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene52647.t1 FIP1, Aspi01Gene52647 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60753.t1 FIP1, Aspi01Gene60753 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g035086 FIP1 not classified & original description: CDS=109-939 0.03 OrthoFinder output from all 47 species
Cba_g26381 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11079 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48555 GEM not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000958001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01012919001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01033015001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01034412001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_00888 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_00889 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_22682 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os02g42440.1 LOC_Os02g42440 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g08860.1 FIP1, LOC_Os03g08860 GEM-like protein 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os03g52670.1 FIP1, LOC_Os03g52670 GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g44510.1 LOC_Os04g44510 GEM-like protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g29400.1 LOC_Os12g29400 GEM-like protein 5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g08110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18424 FIP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g45212 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10147276g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10255128g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_99608g0020 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g17580.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g07508 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g098660.3.1 Solyc03g098660 GEM-like protein 4 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Solyc11g011600.3.1 Solyc11g011600 GEM-like protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g05448 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05449 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20230 FIP1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023068_P001 Zm00001e023068 GEM-like protein 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e039556_P001 Zm00001e039556 GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041280_P002 Zm00001e041280 GEM-like protein 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e041281_P001 Zm00001e041281 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004182 GRAM 132 205
No external refs found!