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  5. AMTR_s00016p00087320

AMTR_s00016p00087320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.49

No description available


Gene families : OG0005659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00087320
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT1G28140 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
Adi_g025152 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g103084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14737 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g07445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_06458 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g63360.1 LOC_Os03g63360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g42532 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03879 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10430187g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g14057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05957 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19351 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g00502 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c8_12800V3.1 Pp3c8_12800 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g00719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08050 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17124 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e006369_P002 Zm00001e006369 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR019275 DUF2301 148 286
No external refs found!