1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00016p00083040

AMTR_s00016p00083040 (LFY, LFY3,...)


Aliases : LFY, LFY3, evm_27.TU.AmTr_v1.0_scaffold00016.45

Description : RNA biosynthesis.transcriptional activation.LFY transcription factor


Gene families : OG0004745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004745_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00083040
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Adi_g018762 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.03 OrthoFinder output from all 47 species
Ala_g22039 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.03 OrthoFinder output from all 47 species
Aop_g07290 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.03 OrthoFinder output from all 47 species
Ceric.33G031700.1 LFY, LFY3,... transcription factor *(LEAFY) of floral meristem... 0.05 OrthoFinder output from all 47 species
Dde_g05840 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.03 OrthoFinder output from all 47 species
Ehy_g22446 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.05 OrthoFinder output from all 47 species
GSVIVT01008655001 LFY, LFY3 RNA biosynthesis.transcriptional activation.LFY... 0.05 OrthoFinder output from all 47 species
LOC_Os04g51000.1 LFY, LFY3, LOC_Os04g51000 transcription factor (LFY) 0.07 OrthoFinder output from all 47 species
MA_108198g0010 LFY, LFY3 transcription factor (LFY) 0.04 OrthoFinder output from all 47 species
MA_47952g0010 LFY, LFY3 transcription factor (LFY) 0.03 OrthoFinder output from all 47 species
Msp_g07909 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.04 OrthoFinder output from all 47 species
Nbi_g02096 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008091 LFY, LFY3 transcription factor *(LEAFY) of floral meristem... 0.02 OrthoFinder output from all 47 species
Spa_g13395 LFY, LFY3 LFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007066_P002 LFY, LFY3, Zm00001e007066 transcription factor (LFY) 0.07 OrthoFinder output from all 47 species
Zm00001e041565_P001 LFY, LFY3, Zm00001e041565 transcription factor (LFY) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002910 FLO_LFY 1 374
No external refs found!