AMTR_s00016p00014890 (FATB,...)

Aliases : FATB, evm_27.TU.AmTr_v1.0_scaffold00016.2

Description : Lipid metabolism.fatty acid synthesis.fatty acid chain termination.palmitoyl-ACP thioesterase

Gene families : OG0000593 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000593_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00016p00014890

Target	Alias	Description	ECC score	Gene Family Method
Ala_g33050	FATB	palmitoyl-ACP thioesterase *(FatM) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g07003	FaTA, AtFaTA	oleoyl-ACP thioesterase *(FATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g34322	FATB	palmitoyl-ACP thioesterase *(FatM) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene41439.t1	Aspi01Gene41439	oleoyl-ACP thioesterase *(FATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g08294	FaTA, AtFaTA	oleoyl-ACP thioesterase *(FATA) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os06g05130.1	FATB, LOC_Os06g05130	palmitoyl-ACP thioesterase	0.02	OrthoFinder output from all 47 species
Mp2g25150.1	FATB	palmitoyl-ACP thioesterase. palmitoyl-ACP thioesterase (FatM)	0.02	OrthoFinder output from all 47 species
Msp_g37066	FATB	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g30955	FATB	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g52096	FATB	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e029986_P001	FATB, Zm00001e029986	palmitoyl-ACP thioesterase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016790	thiolester hydrolase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
BP	GO:0006909	phagocytosis	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002864	Acyl-ACP_thioesterase	88	348

External Links

No external refs found!