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  5. AMTR_s00014p00241360

AMTR_s00014p00241360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00014.111

No description available


Gene families : OG0008375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00014p00241360

Target Alias Description ECC score Gene Family Method Actions
Adi_g023752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G071800.1 Ceric.18G071800 not classified & original description: pacid=50622149... 0.04 OrthoFinder output from all 47 species
Dcu_g14380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g49060.1 LOC_Os05g49060 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g59022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
InterPro domains Description Start Stop
IPR007570 Uncharacterised_Ycf23 6 179
No external refs found!