AMTR_s00014p00122360 (BCS1,...)

Aliases : BCS1, evm_27.TU.AmTr_v1.0_scaffold00014.44

Description : AAA-ATPase At3g50940 OS=Arabidopsis thaliana

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00014p00122360

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00176790	BCS1,...	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AT2G18193	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
AT5G17760	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
Adi_g077316	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene37834.t1	Aspi01Gene37834	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g08373	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.19G071300.1	Ceric.19G071300	not classified & original description: pacid=50576608...	0.04	OrthoFinder output from all 47 species
Ehy_g10044	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os01g40140.1	LOC_Os01g40140	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os10g37500.1	LOC_Os10g37500	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_28097g0010	BCS1	AAA-ATPase At3g28610 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Pir_g04440	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo413949	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Zm00001e003358_P001	AATP1, Zm00001e003358	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e013139_P001	Zm00001e013139	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	34	120
IPR003959	ATPase_AAA_core	194	322

External Links

No external refs found!

AMTR_s00014p00122360 (BCS1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation