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  5. AMTR_s00014p00111720

AMTR_s00014p00111720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00014.40

Description : AAA-ATPase At3g50940 OS=Arabidopsis thaliana


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00014p00111720

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00244740 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G28520 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 OrthoFinder output from all 47 species
AT4G30250 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
Ala_g17638 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g12787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12978 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0349.g066535 No alias not classified & original description: CDS=1-1455 0.02 OrthoFinder output from all 47 species
Cba_g22117 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g08200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03684 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01008088001 No alias AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01010371001 BCS1 AAA-ATPase At5g17760 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023336001 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01029202001 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g40140.1 LOC_Os01g40140 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g02330.1 LOC_Os03g02330 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os12g44190.1 AATP1, LOC_Os12g44190 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Len_g40369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10285593g0010 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10435468g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_23842g0010 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_36352g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g03762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23101 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017710 No alias not classified & original description: CDS=1-1230 0.1 OrthoFinder output from all 47 species
Smo75451 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Solyc05g015060.4.1 Solyc05g015060 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g11504 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30426 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e026657_P001 BCS1, Zm00001e026657 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 4 52
No external refs found!