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  5. AMTR_s00014p00111690

AMTR_s00014p00111690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00014.39

Description : AAA-ATPase At3g28600 OS=Arabidopsis thaliana


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00014p00111690

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267180 BCS1,... AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT2G18190 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 OrthoFinder output from all 47 species
AT5G17740 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
AT5G17760 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 OrthoFinder output from all 47 species
Aev_g05390 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g17775 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g02183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17092 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g02607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_27802 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os12g28137.1 AATP1, LOC_Os12g28137 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28177.1 AATP1, LOC_Os12g28177 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28550.1 LOC_Os12g28550 AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os12g28590.1 AATP1, LOC_Os12g28590 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os12g44210.1 AATP1, LOC_Os12g44210 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g10718 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10285593g0010 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10435468g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_230170g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp7g18570.1 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g28405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo75451 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Zm00001e004348_P001 Zm00001e004348 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!