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  5. AMTR_s00013p00182670

AMTR_s00013p00182670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.112

Description : F-box protein At1g67340 OS=Arabidopsis thaliana


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00182670

Target Alias Description ECC score Gene Family Method Actions
Adi_g054757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02025 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g29053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g30300.1 LOC_Os02g30300 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g08620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001138 No alias not classified & original description: CDS=458-2101 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013455 No alias not classified & original description: CDS=833-2278 0.04 OrthoFinder output from all 47 species
Smo171141 No alias F-box protein At1g67340 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002893 Znf_MYND 358 399
IPR006597 Sel1-like 209 247
IPR006597 Sel1-like 249 278
IPR006597 Sel1-like 177 194
No external refs found!