AMTR_s00013p00174150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.96

Description : Cell wall.hemicellulose.xylan.modification and degradation.glucuronoxylan 4-O-methyltransferase


Gene families : OG0001631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001631_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00174150

Target Alias Description ECC score Gene Family Method Actions
AT1G09610 No alias Protein of unknown function (DUF579) 0.02 OrthoFinder output from all 47 species
AT3G50220 No alias Protein of unknown function (DUF579) 0.02 OrthoFinder output from all 47 species
AT5G67210 No alias Protein of unknown function (DUF579) 0.02 OrthoFinder output from all 47 species
Adi_g095331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33374 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05404 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_12265 No alias glucuronoxylan 4-O-methyltransferase 0.03 OrthoFinder output from all 47 species
Gb_31046 No alias glucuronoxylan 4-O-methyltransferase 0.03 OrthoFinder output from all 47 species
Gb_35413 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g47310.1 LOC_Os06g47310 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_195978g0010 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g10892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16934 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01166 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013082_P001 Zm00001e013082 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e039770_P002 Zm00001e039770 glucuronoxylan 4-O-methyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021148 Polysacc_synth_dom 69 253
No external refs found!