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  5. AMTR_s00013p00085730

AMTR_s00013p00085730 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.39

Description : RNA biosynthesis.transcriptional activation.CAMTA transcription factor


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00085730

Target Alias Description ECC score Gene Family Method Actions
AT4G16150 No alias calmodulin binding;transcription regulators 0.02 OrthoFinder output from all 47 species
Aev_g01603 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13891 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035027001 No alias RNA biosynthesis.transcriptional activation.CAMTA... 0.02 OrthoFinder output from all 47 species
Zm00001e018809_P002 Zm00001e018809 transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR020683 DUF3447 579 667
IPR000048 IQ_motif_EF-hand-BS 840 860
IPR000048 IQ_motif_EF-hand-BS 817 836
IPR002909 IPT_dom 411 493
No external refs found!