1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00013p00072460

AMTR_s00013p00072460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.31

No description available


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00072460

Target Alias Description ECC score Gene Family Method Actions
AT3G50120 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
Ala_g06779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12181 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26669 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08493.t1 Aspi01Gene08493 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22022.t1 Aspi01Gene22022 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22908.t1 Aspi01Gene22908 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48412.t1 Aspi01Gene48412 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014791001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017510001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_20970 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_28782 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os08g30520.1 LOC_Os08g30520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g11757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429513g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_9718623g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g26242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17300 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37513 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g30785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g068340.3.1 Solyc06g068340 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g04556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e041187_P001 Zm00001e041187 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 29 149
No external refs found!