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  5. AMTR_s00012p00261730

AMTR_s00012p00261730 (CPUORF7,...)


Aliases : CPUORF7, evm_27.TU.AmTr_v1.0_scaffold00012.327

Description : Transcription factor LHW OS=Arabidopsis thaliana


Gene families : OG0001070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00261730

Target Alias Description ECC score Gene Family Method Actions
Aev_g30832 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08769 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13571 LHW LHW/LHL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07760 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11990 EMB1444 LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22410 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g45170.1 LHW, LOC_Os02g45170 Transcription factor LHW OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g15391 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27140 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e041446_P005 LHW, Zm00001e041446 Transcription factor LHW OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 5 181
No external refs found!