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  5. AMTR_s00012p00257960

AMTR_s00012p00257960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.304

Description : Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0007302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00257960

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene24909.t1 Aspi01Gene24909 not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os01g05080.1 LOC_Os01g05080 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_10232509g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
MA_503287g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
Nbi_g06581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14110 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e025798_P001 Zm00001e025798 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 138 173
No external refs found!