AMTR_s00012p00252840 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.263

Description : Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP1 protein


Gene families : OG0006730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006730_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00252840

Target Alias Description ECC score Gene Family Method Actions
AT5G02120 OHP one helix protein 0.07 OrthoFinder output from all 47 species
Adi_g015882 OHP LHC-related protein *(OHP1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44873 OHP LHC-related protein *(OHP1) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54203 OHP LHC-related protein *(OHP1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g48648 OHP LHC-related protein *(OHP1) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.35G031400.1 OHP, Ceric.35G031400 LHC-related protein *(OHP1) & original description:... 0.05 OrthoFinder output from all 47 species
Cre02.g109950 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Dac_g27459 OHP LHC-related protein *(OHP1) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g00111 OHP LHC-related protein *(OHP1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02075 OHP LHC-related protein *(OHP1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034129001 OHP Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
LOC_Os05g22730.1 OHP, LOC_Os05g22730 OHP1 LHC-related protein 0.08 OrthoFinder output from all 47 species
Len_g29330 OHP LHC-related protein *(OHP1) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g24229 No alias LHC-related protein *(OHP1) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10117352g0010 OHP OHP1 LHC-related protein 0.02 OrthoFinder output from all 47 species
Ore_g08209 OHP LHC-related protein *(OHP1) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g60607 OHP LHC-related protein *(OHP1) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015925 OHP LHC-related protein *(OHP1) & original description: CDS=1-414 0.03 OrthoFinder output from all 47 species
Sam_g30283 No alias LHC-related protein *(OHP1) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc09g011010.3.1 OHP, Solyc09g011010 OHP1 LHC-related protein 0.04 OrthoFinder output from all 47 species
Tin_g10723 OHP LHC-related protein *(OHP1) & original description: none 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP HCCA

No InterPro domains available for this sequence

No external refs found!