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  5. AMTR_s00012p00248430

AMTR_s00012p00248430 (ATLAC17, LAC17,...)


Aliases : ATLAC17, LAC17, evm_27.TU.AmTr_v1.0_scaffold00012.238

Description : Cell wall.lignin.monolignol conjugation and polymerization.lignin laccase


Gene families : OG0000044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00248430

Target Alias Description ECC score Gene Family Method Actions
AT5G01050 No alias Laccase/Diphenol oxidase family protein 0.03 OrthoFinder output from all 47 species
Aev_g21502 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aev_g22101 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aev_g36617 LAC6 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aev_g36878 LAC12 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ala_g31707 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aop_g17511 LAC6 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ceric.12G062600.1 LAC11, Ceric.12G062600 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ceric.34G019700.1 ATLAC2, LAC2,... EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Dde_g29816 LAC12 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
GSVIVT01012335001 LAC14 Laccase-14 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01018939001 LAC11 Laccase-11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01024795001 LAC4, IRX12,... Cell wall.lignin.monolignol conjugation and... 0.02 OrthoFinder output from all 47 species
GSVIVT01025077001 ATLAC17, LAC17 Cell wall.lignin.monolignol conjugation and... 0.04 OrthoFinder output from all 47 species
GSVIVT01033501001 LAC11 Laccase-11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01034003001 LAC4, IRX12,... Cell wall.lignin.monolignol conjugation and... 0.03 OrthoFinder output from all 47 species
GSVIVT01034137001 ATLAC17, LAC17 Cell wall.lignin.monolignol conjugation and... 0.03 OrthoFinder output from all 47 species
LOC_Os01g44330.1 LAC11, LOC_Os01g44330 Laccase-2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g14897 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
MA_185257g0010 LAC12 Laccase-12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_57140g0020 LAC12 Laccase-12 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_7231685g0010 LAC12 Putative laccase-17 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp3g20310.1 LAC11 Laccase-2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Ppi_g17908 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ppi_g31973 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ppi_g33390 ATLAC2, LAC2 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014969 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Smo105894 ATLAC17, LAC17 Laccase-4 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Smo230356 LAC12 Laccase-4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Solyc04g054690.3.1 Solyc04g054690 Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.05 OrthoFinder output from all 47 species
Solyc05g043360.3.1 LAC7, Solyc05g043360 Laccase-7 OS=Arabidopsis thaliana (sp|q9sr40|lac7_arath... 0.03 OrthoFinder output from all 47 species
Tin_g37198 No alias EC_1.10 oxidoreductase acTing on diphenol or related... 0.02 OrthoFinder output from all 47 species
Tin_g40230 ATLAC17, LAC17 EC_1.10 oxidoreductase acTing on diphenol or related... 0.02 OrthoFinder output from all 47 species
Tin_g44408 LAC11 EC_1.10 oxidoreductase acTing on diphenol or related... 0.03 OrthoFinder output from all 47 species
Zm00001e019315_P001 ATLAC17, LAC17,... lignin laccase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_N 39 151
IPR001117 Cu-oxidase_2nd 165 316
IPR011706 Cu-oxidase_C 432 563
No external refs found!