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  5. AMTR_s00012p00224800

AMTR_s00012p00224800 (ATPDR3, PDR3,...)


Aliases : ATPDR3, PDR3, evm_27.TU.AmTr_v1.0_scaffold00012.174

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00224800

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00117010 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Adi_g014210 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21077 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07828 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06909 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70240 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02116.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20025.t1 PDR1, ATPDR1,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64035.t2 PDR6, ATPDR6,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27199 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cre12.g540650 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Dac_g13610 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17111 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05962 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07439 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017188001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01031378001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01036184001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_30095 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g08260.1 PDR4, ATPDR4,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Len_g12160 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05743 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_10425791g0020 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_10427683g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_135152g0010 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_17319g0020 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_18770g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp2g07030.1 PDR6, ATPDR6 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Ore_g16126 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10465 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c18_21520V3.1 PDR1, ATPDR1,... ABC-2 and Plant PDR ABC-type transporter family protein 0.01 OrthoFinder output from all 47 species
Ppi_g15527 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31992 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59241 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo99541 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Spa_g18419 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28903 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56174 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24868 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030669_P001 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
InterPro domains Description Start Stop
IPR013581 PDR_assoc 537 593
IPR013525 ABC_2_trans 321 532
IPR013525 ABC_2_trans 858 1045
No external refs found!