AMTR_s00012p00184530 (ATPB, PB,...)


Aliases : ATPB, PB, evm_27.TU.AmTr_v1.0_scaffold00012.116

Description : Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit epsilon


Gene families : OG0007659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007659_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00184530
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
ATCG00470 ATPE ATP synthase epsilon chain 0.06 OrthoFinder output from all 47 species
Aev_g00175 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.11 OrthoFinder output from all 47 species
Aob_g00470 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 OrthoFinder output from all 47 species
Ceric.09G048600.1 ATPE, Ceric.09G048600 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Ceric.1Z017800.1 ATPE, Ceric.1Z017800 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.05 OrthoFinder output from all 47 species
Ceric.1Z161900.1 ATPE, Ceric.1Z161900 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 OrthoFinder output from all 47 species
Dcu_g39139 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
Gb_04062 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.07 OrthoFinder output from all 47 species
Gb_06833 ATPB, PB subunit epsilon of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
Gb_25936 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
LOC_Os01g58000.1 ATPE, LOC_Os01g58000 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.13 OrthoFinder output from all 47 species
LOC_Os03g55874.1 ATPB, PB, LOC_Os03g55874 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.13 OrthoFinder output from all 47 species
LOC_Os06g02980.1 ATPB, PB, LOC_Os06g02980 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
LOC_Os06g39756.1 ATPE, LOC_Os06g39756 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
LOC_Os10g21264.1 ATPE, LOC_Os10g21264 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.01 OrthoFinder output from all 47 species
LOC_Os12g19430.1 ATPE, LOC_Os12g19430 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.12 OrthoFinder output from all 47 species
Lfl_g18092 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Smo137774 ATPE Photosynthesis.photophosphorylation.ATP synthase... 0.09 OrthoFinder output from all 47 species
Solyc01g017220.2.1 ATPE, Solyc01g017220 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Zm00001e003900_P001 ATPE, Zm00001e003900 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
Zm00001e042031_P001 ATPE, Zm00001e042031 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
Zm00001e042052_P001 ATPE, Zm00001e042052 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
Zm00001e042080_P001 ATPE, Zm00001e042080 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
Zm00001e042096_P001 ATPE, Zm00001e042096 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0015986 proton motive force-driven ATP synthesis IEA Interproscan
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEA Interproscan
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEA Interproscan
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 3 178
IPR020546 ATP_synth_F1_dsu/esu_N 175 241
IPR020547 ATP_synth_F1_esu_C 245 291
No external refs found!