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  5. AMTR_s00012p00169450

AMTR_s00012p00169450 (PGGT-I, ATGGT-IB,...)


Aliases : PGGT-I, ATGGT-IB, GGB, evm_27.TU.AmTr_v1.0_scaffold00012.104

Description : Protein modification.lipidation.Cys-linked prenylation.type-I protein prenyltransferase complex.subunit beta


Gene families : OG0007125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00169450
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Dcu_g04568 PGGT-I, ATGGT-IB, GGB subunit beta of type-I protein prenyltransferase complex... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 263 305
IPR001330 PFTB_repeat 216 259
IPR001330 PFTB_repeat 37 103
IPR001330 PFTB_repeat 159 201
No external refs found!