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  5. AMTR_s00011p00261920

AMTR_s00011p00261920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.196

No description available


Gene families : OG0001346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001346_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00261920

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g35820.1 LOC_Os05g35820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g17559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015571_P001 Zm00001e015571 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
InterPro domains Description Start Stop
IPR009606 DEAL/Modifying_wall_lignin1/2 59 154
No external refs found!