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  5. AMTR_s00011p00222440

AMTR_s00011p00222440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.98

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV accessory factors.AUL clathrin uncoating protein


Gene families : OG0000516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000516_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00222440

Target Alias Description ECC score Gene Family Method Actions
AT1G21660 No alias Chaperone DnaJ-domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G75310 AUL1 auxin-like 1 protein 0.03 OrthoFinder output from all 47 species
AT4G36520 No alias Chaperone DnaJ-domain superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g015102 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016064 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082741 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20496 No alias clathrin uncoating protein *(AUL) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene50602.t1 Aspi01Gene50602 clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35468 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G023400.1 Ceric.18G023400 clathrin uncoating protein *(AUL) & original... 0.02 OrthoFinder output from all 47 species
Dac_g23190 No alias clathrin uncoating protein *(AUL) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02857 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06212 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21287 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009738001 AUL1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
LOC_Os05g50370.1 LOC_Os05g50370 clathrin uncoating protein (AUL) 0.02 OrthoFinder output from all 47 species
Nbi_g10745 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25581 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32492 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005621 No alias clathrin uncoating protein *(AUL) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021144 No alias clathrin uncoating protein *(AUL) & original... 0.02 OrthoFinder output from all 47 species
Solyc04g080600.3.1 Solyc04g080600 clathrin uncoating protein (AUL) 0.05 OrthoFinder output from all 47 species
Zm00001e020383_P002 Zm00001e020383 clathrin uncoating protein (AUL) 0.06 OrthoFinder output from all 47 species
Zm00001e032522_P001 Zm00001e032522 clathrin uncoating protein (AUL) 0.02 OrthoFinder output from all 47 species
Zm00001e039690_P002 Zm00001e039690 clathrin uncoating protein (AUL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 1000 1048
No external refs found!