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  5. AMTR_s00011p00222000

AMTR_s00011p00222000 (OTC,...)


Aliases : OTC, evm_27.TU.AmTr_v1.0_scaffold00011.97

Description : Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.ornithine carbamoyltransferase


Gene families : OG0003398 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00222000

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g47590.1 OTC, LOC_Os02g47590 ornithine carbamoyltransferase 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002481 OTC EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEA Interproscan
MF GO:0016597 amino acid binding IEA Interproscan
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0051186 obsolete cofactor metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006132 Asp/Orn_carbamoyltranf_P-bd 2 129
IPR006131 Asp_carbamoyltransf_Asp/Orn-bd 134 285
No external refs found!