- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.65
Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS25 component
Gene families : OG0000493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000493_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G21580 | No alias | Ribosomal protein S25 family protein | 0.08 | OrthoFinder output from all 47 species | |
| AT4G34555 | No alias | Ribosomal protein S25 family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT4G39200 | No alias | Ribosomal protein S25 family protein | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g007622 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g042160 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g042161 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g090228 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g09917 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g20286 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g12873 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g09889 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06428 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g16859 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g37907 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene24877.t1 | Aspi01Gene24877 | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g70462 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G003600.1 | Ceric.10G003600 | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000037.5 | No alias | 40S ribosomal protein S25-4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Cre08.g382500 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g04328 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g24943 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g25480 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g33046 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g23757 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g35742 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01010721001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01023806001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_01693 | No alias | component RPS25 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Gb_29693 | No alias | component RPS25 of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os08g44480.1 | LOC_Os08g44480 | component RPS25 of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g39540.1 | LOC_Os09g39540 | component RPS25 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g05562.1 | LOC_Os11g05562 | component RPS25 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Len_g05947 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| MA_104137g0010 | No alias | component RPS25 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| MA_10430279g0010 | No alias | component RPS25 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| Mp4g06120.1 | No alias | component RPS25 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g10038 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g19579 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g00738 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g04161 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c14_13580V3.1 | Pp3c14_13580 | Ribosomal protein S25 family protein | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c17_4670V3.1 | Pp3c17_4670 | Ribosomal protein S25 family protein | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c1_25330V3.1 | Pp3c1_25330 | Ribosomal protein S25 family protein | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g12013 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g25225 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017022 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g20177 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g30236 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g31087 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g31249 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37229 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g40302 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g42051 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo172404 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g069850.3.1 | Solyc02g069850 | component RPS25 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03086 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g03786 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g35500 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g35986 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g36308 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g48440 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g56646 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003921_P001 | Zm00001e003921 | component RPS25 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019589_P001 | Zm00001e019589 | component RPS25 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e022058_P001 | Zm00001e022058 | component RPS25 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028930_P001 | Zm00001e028930 | component RPS25 of SSU proteome | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006450 | regulation of translational fidelity | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0065008 | regulation of biological quality | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004977 | Ribosomal_S25 | 1 | 106 |
| No external refs found! |