AMTR_s00011p00193440 (emb2184,...)

Aliases : emb2184, evm_27.TU.AmTr_v1.0_scaffold00011.59

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL31 component

Gene families : OG0005954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005954_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00011p00193440

Target	Alias	Description	ECC score	Gene Family Method
Aop_g39319	emb2184	component *(bL31c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Ceric.01G009700.1	emb2184, Ceric.01G009700	component *(bL31c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Cre08.g365400	emb2184	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
LOC_Os01g44210.1	emb2184, LOC_Os01g44210	component psRPL31 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Lfl_g27173	emb2184	component *(bL31c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004807	triose-phosphate isomerase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002150	Ribosomal_L31	35	100

External Links

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AMTR_s00011p00193440 (emb2184,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation