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  5. AMTR_s00011p00072820

AMTR_s00011p00072820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.14

No description available


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00072820

Target Alias Description ECC score Gene Family Method Actions
AT1G29350 No alias Kinase-related protein of unknown function (DUF1296) 0.03 OrthoFinder output from all 47 species
Adi_g008163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20545 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g11714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.27G004200.1 Ceric.27G004200 not classified & original description: pacid=50604818... 0.03 OrthoFinder output from all 47 species
Ceric.29G083800.1 Ceric.29G083800 not classified & original description: pacid=50624429... 0.04 OrthoFinder output from all 47 species
Dcu_g18699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00263 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g47430.1 LOC_Os01g47430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49180.1 LOC_Os05g49180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g08670.1 LOC_Os09g08670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g09442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_137710g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_17760g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_60376g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g17436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0233.g026486 No alias not classified & original description: CDS=154-2919 0.02 OrthoFinder output from all 47 species
Sam_g13683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g071180.3.1 Solyc02g071180 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Tin_g14041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g37858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026550_P001 Zm00001e026550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 18 76
No external refs found!