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  5. AMTR_s00010p00266770

AMTR_s00010p00266770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.528

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF1 PIC assembly factor


Gene families : OG0000506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00266770

Target Alias Description ECC score Gene Family Method Actions
AT4G27130 No alias Translation initiation factor SUI1 family protein 0.02 OrthoFinder output from all 47 species
Als_g43580 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47733 No alias assembly factor (eIF1) of eIF1 & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07516 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26057 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67772.t1 Aspi01Gene67772 assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67777.t1 Aspi01Gene67777 assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31417 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G008800.1 Ceric.06G008800 assembly factor (eIF1) of eIF1 & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G005000.1 Ceric.07G005000 assembly factor (eIF1) of eIF1 & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.26G055600.1 Ceric.26G055600 assembly factor (eIF1) of eIF1 & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g03715 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11955 No alias assembly factor (eIF1) of eIF1 & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28226 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20659 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10279 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g22822 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54810 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g064150.4.1 Solyc07g064150 assembly factor (eIF1) of eIF1 0.05 OrthoFinder output from all 47 species
Spa_g02983 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10696 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22324 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
CC GO:0019008 molybdopterin synthase complex IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 90 169
No external refs found!