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Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.513
Description : RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana
Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G03110 | No alias | RNA binding;nucleic acid binding | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g019262 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g075813 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080529 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g092270 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g106357 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g108733 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g08517 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33155 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g10637 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g19887 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g29218 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g62599 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g17642 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G052900.1 | Ceric.02G052900 | not classified & original description: pacid=50583938... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G007100.1 | Ceric.14G007100 | not classified & original description: pacid=50632910... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.25G027100.1 | Ceric.25G027100 | not classified & original description: pacid=50594480... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.32G028300.1 | Ceric.32G028300 | not classified & original description: pacid=50598029... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g09565 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g22559 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31111 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g24061 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03943 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18057 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031037001 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_31686 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32436 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g32300.1 | LOC_Os09g32300 | KH domain-containing protein HEN4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18926 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02093 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04023 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g04773 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05526 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10430861g0010 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_3715g0020 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| MA_6622g0010 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g04932 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05364 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03833 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06772 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g07144 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10011 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g21684 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g22391 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g00616 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g10935 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g32788 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02290 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06368 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0026.g009457 | No alias | not classified & original description: CDS=528-2219 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13844 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16383 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g35222 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Solyc01g106020.3.1 | HEN4, Solyc01g106020 | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g067210.3.1 | Solyc02g067210 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc03g034200.3.1 | Solyc03g034200 | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g082980.3.1 | Solyc03g082980 | RNA-binding KH domain-containing protein RCF3... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g007810.3.1 | Solyc05g007810 | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g055780.3.1 | Solyc12g055780 | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g05212 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07753 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g30529 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02804 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g07199 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026127_P004 | Zm00001e026127 | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039986_P003 | Zm00001e039986 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
| BP | GO:0006664 | glycolipid metabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| BP | GO:0030258 | lipid modification | IEP | HCCA |
| BP | GO:0030259 | lipid glycosylation | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| MF | GO:0031369 | translation initiation factor binding | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | HCCA |
| No external refs found! |