1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00010p00264160

AMTR_s00010p00264160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.498

No description available


Gene families : OG0002370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002370_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00264160

Target Alias Description ECC score Gene Family Method Actions
Ceric.03G060500.1 Ceric.03G060500 not classified & original description: pacid=50571611... 0.02 OrthoFinder output from all 47 species
Ceric.1Z270600.1 Ceric.1Z270600 not classified & original description: pacid=50639206... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s1761.g028157 No alias not classified & original description: CDS=1-525 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s3356.g028727 No alias not classified & original description: CDS=59-583 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004519 endonuclease activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR002711 HNH 112 151
No external refs found!